History

Unreleased

  • Renamed the Cell-GPS manuscript code/ folder to Cell-GPS manuscript/ and updated all README, documentation, and project-URL references.

  • Documented the COSTE extension manuscripts under manuscripts/ in the README and repository layout.

  • Removed superseded duplicate scripts from benchmarking/, moved the cell-based COSTE-HistoSeg script and benchmark log into the segmentation-free transcript-domain manuscript folder, and removed a duplicate Windows build-guide .docx.

  • Organized root-level project notes and Windows packaging assets into dedicated folders.

  • Moved legacy conda recipe and small example data files out of the repository root.

  • Updated README and documentation installation instructions to use the official conda-forge package.

  • Removed the legacy GitHub Actions workflow for publishing the old non-conda-forge package.

0.0.6 (2026-05-30)

  • Corrected README conda installation instructions while preparing conda packaging.

  • Hardened the GitHub Actions workflow previously used during early conda packaging.

0.0.5 (2026-05-30)

  • Updated the README to connect Cell-GPS with the bioRxiv preprint.

  • Documented the curated figure and table notebooks under Cell-GPS manuscript/.

  • Added PyPI project links for the preprint and manuscript code.

0.0.2 (2026-04-02)

  • Refreshed reviewer-facing documentation in English.

  • Added a repository walkthrough for manuscript review.

  • Updated package and documentation entry points to match the current workflow.

0.1.0 (2025-01-03)

  • First release on PyPI.